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LS swap tune checklist

What has to change in a donor computer before the swap will run and drive right, and the parts that have to match it.

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Tune checklist for your build: pick engine, computer, trans →

In the tune

In short: Every donor PCM needs reprogramming: delete VATS (or the engine will not start), match injector size and MAF scaling, and match transmission settings; emissions monitors and speed limiters from the donor are also present.

Parts that must match the computer

What the computer does

The PCM reads crank, cam, MAF, coolant, IAT and O2 sensors to control fuel, spark and idle (and shifts on automatics); on drive-by-wire engines it also controls the throttle.

The details

Specifics depend on your computer and operating system.

Show all
  • E92; LT4; 2015-2020: The Chevrolet Performance LT4 E-Rod controller has a tachometer output of four pulses per engine revolution (square wave); some tachometers need a 5,000-ohm pull-up resistor.
  • E92; LT4; 2015-2020: The LT4 E-Rod controller provides a vehicle-speed output intended for self-scaling speedometers, but it requires a variable-reluctance speed sensor on the transmission to function.
  • 0411, 1181; LM7, LQ4, LQ9, LS1; 1999-2007: The official segment swapper copies transmission calibration data from a donor file to a recipient file only when both files share the same main operating-system number, and the full write is what installs the transferred transmission data.
  • 0411, 1181; LM7, LQ4, LQ9; 1999-2007: A proper 4L60E-to-4L80E segment swap moves both the transmission segment and the transmission-diagnostics segment from the donor file.
  • 0411, 1181; LM7, LQ4, LQ9; 1999-2007: The segment-swapped transmission calibration requires a full write to the controller to take effect; a calibration-only write does not install it.
  • 0411, 1181; LM7, LQ4, LQ9; 1999-2007: The donor file for a segment swap should come from a factory application similar to the swap, and its operating system should already support the desired transmission.
  • E38; LS2, LS3, L96; 2006-2015: On the E38, a VATS removal uses the Write-VIN/Tunerlock/VATS flash routine, which differs from other modules where a write-entire generally handles tuner-lock and VATS changes.
  • 0411; LM7, LQ4, LQ9, L31; 1999-2002: The 12200411 service-number PCM is the P01-generation Gen III controller; 0411 units sourced from different factory applications can function once loaded with a calibration matched to the swap.
  • 0411; LM7, LQ4, LQ9; 1999-2002: No single donor application of the 0411 is inherently better; any 0411 can run a swap when flashed with the right tune.
  • 0411; LM7, LQ4, LQ9, LS1; 1999-2002: The 0411 hardware can operate both drive-by-cable and drive-by-wire throttles, but the calibration must be configured to match the throttle type installed.
  • 0411, 1181; LM7, LQ4, LQ9; 1999-2007: A calibration written for a cable-operated engine cannot operate a drive-by-wire throttle; the PCM needs a complete operating-system reflash matching the throttle architecture.
  • 0411; LM7, LQ4, LQ9, LS1; 1999-2002: The 0411 requires the matching 1999-2002 truck Throttle Actuator Control module for drive-by-wire; the visually identical 1997-2004 Corvette TAC module carries a different part number and is not interchangeable.
  • 0411, 1181; LM7, LQ4, LQ9; 1999-2007: 1999-2002 truck electronic-throttle systems use all three accelerator-pedal position signals, while 2003 and later systems use only two of the three pedal sensors.
  • 0411, 1181; LM7, LQ4, LQ9; 1999-2007: The 2003-up Gen III throttle body, TAC module and PCM are not backward compatible with 1999-2002 equipment, so pedal, module and throttle must come from a matched year range.
  • 0411; LM7, LQ4, LQ9, LS1; 1999-2002: Not every Gen III PCM carries idle-air-control driver hardware; the 12200411 is the recommended service number for cable-throttle swaps because its hardware and availability are known.
  • 0411; LS1; 1999-2003: 0411 PCMs found in 1999-2003 Corvettes left the factory set up for drive-by-wire only, so they must be reprogrammed before use in a cable-throttle swap.
  • 0411; L31; 2002: A 2002 Chevrolet Express van operating system 12212156 is a common 0411 base file for Vortec L31 conversions because it was factory-built for the van application.
  • 0411; L31, LM7, LQ4; 1999-2002: A typical 0411 swap base calibration disables VATS, suppresses alternator/generator fault codes that the swap harness does not wire, adjusts fuel-tank-pressure and post-catalyst O2 diagnostics to the installed hardware, and carries the correct VIN.
  • 0411, 1181; LM7, LQ4, LQ9, LS1; 1999-2007: A swap tune must correct the calibration for the actual injector flow rates, volumetric efficiency, spark advance, axle ratio and the presence or absence of EGR, EVAP and secondary-air devices.
  • 0411; LM7, LQ4, LQ9, L31; 1999-2002: Example 0411 swap base files exist for 4L60E 2WD and 4WD, 4L80E 2WD and 4WD, and manual-transmission combinations.
  • E40; LS2; 2005-2006: The E40 is the short-lived 2005-2006 Gen IV controller for 24x-reluctor engines; it integrated throttle-actuator control into the ECM itself, eliminating the separate TAC module of Gen III.
  • E40; LS2; 2005-2006: The E40 pairs only with the 90mm silver-blade four-bolt throttle body; the visually similar gold-blade units are not electronically compatible.
  • E40; LS2; 2005-2006: The E40 carries tall black plus short blue/gray connectors and the controller appeared only in a narrow set of 2005-2006 applications such as the SSR, GTO, early Corvette, TrailBlazer SS and midsize SUVs, making used units comparatively scarce.
  • E40; LS2; 2005-2006: The E40 only controls the engine; transmission control moved to the separate T42 controller, an architecture that continues through Gen IV.
  • E40; LS2; 2005-2006: E40 hardware retains 24x crank triggering and is incompatible with later 58x hardware, so the engine's reluctor generation must match the controller.
  • E38, E67; LS2, LS3, LS7, L96, L92; 2006-2015: Gen IV engines generally moved to a 58-tooth crank wheel controlled by the E38 or E67, and the physical identifier is the crank sensor: black connectors on 24x sensors, gray on 58x.
  • 0411, 1181, E38, E67; LS2, LS3, LS7; 1999-2015: A Gen IV engine cannot be run by a Gen III controller without converting the reluctor wheel and adapting the cam sensor and throttle hardware.
  • E38, E67, E78; LS2, LS3, LS7, L96; 2006-2015: Gen IV controllers communicate over CAN bus, and the separate engine and transmission controllers must run compatible operating systems to exchange torque and speed data.
  • E38, E67; LS2, LS3, LS7, LS9, LSA, L96; 2006-2015: The E38 is a two-connector engine controller and the E67 a three-connector engine controller; the E67 offers wider capability and was used on factory-supercharged LS9 and LSA engines, making it attractive for boosted swaps.
  • E38, E67; LS3, L96, LS7, LSA; 2006-2015: E38/E67 gold-blade throttle bodies share a four-bolt pattern and six-pin connector but have different electronics: the LS truck 87mm and car 90mm bodies are not interchangeable with each other.

Turning VATS off in the software

Values depend on your computer, operating system and combination. Use them as reference points, not settings to copy.

Show all

VATS

  • HP Tuners VCM Editor: Launch VCM Editor, connect to the vehicle and read the current tune with the 'Read Vehicle' option.
  • HP Tuners VCM Editor: After editing a tune, save the file as a backup in case you need to revert to the stock configuration.
  • HP Tuners VCM Suite: VCM Suite (VCM Editor and VCM Scanner) is a free download from HP Tuners.
  • EFILive V7 Tuning Tool: When transplanting the engine into an older chassis without a BCM, you should switch off the security system by setting calibration {G1201} Anti Theft Configuration to "None".
  • HP Tuners VCM Suite: HP Tuners' VATS relink feature is only needed on vehicles with Serial VATS systems.
  • HP Tuners VCM Editor: In VCM Editor, an operating-system modification starts with a stock or existing tune read from the PCM, then the modification (such as the VATS 1/VATS 2 patches), and finishes with a Write Entire.
  • HP Tuners VCM Editor: To disable VATS on non-Alloytec V6 car PCMs in HP Tuners, set the VATS value to "PWM" and set DTCs P1626 and P1629 to "3 - No Error Reported".
  • HP Tuners VCM Suite: Set up the new operating system with all the required VIN, Tunerlock and VATS information, then choose "Write Entire" for the first write.
  • HP Tuners VCM Suite: HP Tuners uses a credit-based licensing system: credits are the currency used to purchase licenses for the different modules in a vehicle.
  • EFILive V7 Tuning Tool: If you replace your PCM or BCM, you must reestablish the trusted link between the PCM and the BCM, and EFILive can do that via the VAT relink process.
  • EFILive V7 Tuning Tool: GM's security system requires the PCM and the BCM to negotiate electronic messages until they agree the cranking attempt is legitimate.
  • EFILive V7 Tuning Tool: Clicking EFILive's VAT relink button tells the PCM to set a flag so it relinks to any BCM it can see when the ignition is next switched on.
  • EFILive V7 Tuning Tool: In EFILive's VAT relink procedure, if the target BCM is already wired into the vehicle, switching the ignition back on lets the PCM relink to the BCM.
  • EFILive V7 Tuning Tool: To link a PCM to a BCM in a different vehicle, disconnect the PCM from the current vehicle or bench harness, connect it to the vehicle with the target BCM, and switch on the ignition.
  • HP Tuners VCM Suite: For HP Tuners' Relink VATS, put the key in the ignition and turn it to ON without starting the vehicle.
  • HP Tuners VCM Suite: HP Tuners' VATS relink works on any vehicle HP Tuners supports.
  • HP Tuners VCM Suite: Don't program a vehicle with battery voltage lower than 11.5 volts.
  • HP Tuners VCM Suite: Use HP Tuners' Rewrite VIN/Tunerlock/VATS option when you've updated the VIN, are relinking VATS, or are applying Tunerlock to lock or unlock the VCM.
  • HP Tuners VCM Suite: For everyday tuning changes, flash with Write Calibration Only. It is the quickest write and the least likely to leave you with a computer that won't talk.
  • EFILive V7 Tuning Tool: With EFILive you only license a PCM the first time you reflash it; after that, FlashScan reflashes it without restriction.
What we recommend
  • Pull the complete electronics. A complete pullout includes the wiring harness, PCM, MAF and the DBW pedal if the donor was drive-by-wire. Get the matching transmission if you can, and avoid 1998 engines with their harder-to-tune PCM.
    How to do it

    Check this first

    1. Check the PCM service code on the donor before you buy — you want 12200411 (0411) or a P59.

    Try this, then this

    1. Grab the complete pullout: harness, PCM, MAF, DBW pedal if equipped, and the matching transmission. — Matched electronics save a tuning and wiring headache later.. Worked if: Everything on the donor came from one vehicle.
    2. If the donor is a 1998, swap in a 99-02 PCM (0411/P59) with its harness pinouts. — The 98 PCM has poor tuning support and is not pin-compatible.. Worked if: HP Tuners reads and licenses the PCM.

    Key numbers

    WhatValue
    1998 PCM is worse for tuningSwappers specifically seek 99-02 PCMs for HP Tuners support
    1999 PCM better with HP Tuners98 PCM dead; 99 PCM from a wrecked C5 expected to be better for tuning
    1999 PCM is not interchangeable with the 1998Redesigned PCM, vastly different pinouts; plugging a 99 PCM into an older harness can damage it

    Every option we know of

    We may earn a commission when you buy through links on this page.

    Maker / productPart #FitsPriceWhereStatus / notes
    GM
    0411 PCM
    122004111999-2002 LS trucks and F-bodiesBuyused
    GM
    P59 PCM
    125862422003-2007 Gen III trucksBuyused

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: Junkyard PCM roughly $50-150; harness repin or swap adds time.

  • Match the DBW pedal and TAC to the PCM. The pedal, TAC module and throttle body must match the PCM and tune, not just the engine; a mismatched same-year pedal can set a code and refuse to run. Use the pedal and TAC from the same donor; Gen IV (2008+) has no TAC module.
    How to do it

    Check this first

    1. Confirm whether your donor PCM expects a TAC module (Gen III/P59/E40) or is direct-wire (E38 Gen IV).
    2. If you get pedal/TAC codes, check part numbers — same year is not the same as same match.

    Try this, then this

    1. Keep the pedal, TAC, throttle body, PCM, and tune from the same donor. — The whole DBW chain is matched to the PCM/OS, not the engine.. Worked if: No pedal/TAC codes and the throttle responds.
    2. On a 2007+ Gen IV (E38) swap, skip the TAC entirely and wire the pedal direct to the ECM. — Gen IV E38 PCMs have no TAC module.. Worked if: Pedal signal reaches the ECM with no TAC in the loop.

    Key numbers

    WhatValue
    Mismatched same-year pedal sets a code and refuses to runNeeded an exact ECM/engine match after the ECM rejected the pedal
    TAC, pedal, and throttle body must match the PCM and tuneNot just the engine — the whole DBW chain follows the PCM
    Wrong-year TAC module = REP mode'05 TAC incompatible with '06; all components must match

    Every option we know of

    Maker / productPart #FitsPriceWhereStatus / notes
    GM
    DBW pedal + TAC module from the same donor vehicle
    Must match PCM and tune year/OSjunkyard / donor pulloutused
    Same-year-different-match pedals set codes
    GM
    Gen IV E38 direct-wire DBW pedal (no TAC)
    2007+ Gen IV trucks/SUVs with E38junkyard / donor pulloutused

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: Free if it comes with the donor pullout; a wrong guess costs a tow and a second junkyard trip.

  • Cable throttle is the simpler path. If the vehicle had a cable throttle, reusing a cable intake and throttle body avoids the pedal, TAC module and extra ECM wiring that DBW requires.
    How to do it

    Check this first

    1. Decide cable vs DBW before buying the intake — the throttle body, pedal, and ECM wiring all follow that choice.

    Try this, then this

    1. If the vehicle had a cable throttle, run a cable intake and throttle body. — No pedal, no TAC, no extra ECM wiring — the DBW failure modes disappear.. Worked if: Throttle opens with the pedal and the PCM never knows the difference.

    Key numbers

    WhatValue
    DBW adds failure modes a cable setup never hasMismatched pedal or TAC = codes, no-run, or REP mode
    Swappers rate Gen IV DBW-era electronics as a painOne swapper would go back to Gen 3 cable-era stuff for the next swap

    Every option we know of

    Maker / productPart #FitsPriceWhereStatus / notes
    GM
    LS1/LS6 cable throttle body and cable intake
    Gen III 24x combos with P01/P59 PCMjunkyard / usedused
    Needs cable brackets
    Aftermarket
    Cable conversion brackets for LS throttle bodies
    LS cable throttle bodiesSummit / dealersactive

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: Usually cheaper than sourcing a matched DBW pedal/TAC set.

  • Handle VATS and settings in one flash. Delete VATS in the tune, and set 4L60E shift points and the tach cylinder output in the same session so you only pay for one visit.
    How to do it

    Check this first

    1. Read the PCM first (free) and save the stock file — it is the most important file of all.
    2. List everything you want changed before the tuner (or you) writes: VATS, shift points, tach output, fans, speedo.

    Try this, then this

    1. Batch every change — VATS delete, 4L60E shift points, tach cylinder output — into one write. — One license covers unlimited flashes to that computer, and a shop charges per visit.. Worked if: Engine starts without VATS, shifts where you want, tach reads right — one trip.

    Key numbers

    WhatValue
    VATS delete is a checkboxTuner quote around $200 to do it all in one go
    One license covers unlimited changes to that PCMAll changes to the licensed file are free; unlimited flashes
    Reading costs nothing; you pay when you editRead the PCM free, pay to license and write

    Every option we know of

    Maker / productPart #FitsPriceWhereStatus / notes
    WAIT4ME Performance
    Mail-order programmed PCM
    LS swapswebactive
    DIY
    HP Tuners MPVI2/MPVI3/MPVI4 + credits
    Supported LS PCMs2 credits per PCM typical for truckshptuners.comactive

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: Roughly $200 at a shop for the bundle; 2 HP Tuners credits if you DIY.

  • Verify 24x or 58x before buying. Gen III is generally 24x and Gen IV is 58x, and the ECM must match. To run a Gen IV block on Gen III electronics, use a Gen 3 crank sensor with the 24x reluctor, a Gen 4 front cover and cam sensor, and a 1x cam sprocket, and swap pins A and C on the cam sensor harness.
    How to do it

    Check this first

    1. Identify the reluctor before buying: crank sensor at the rear = 24x (black connector), on the side = 58x (grey connector).
    2. Match the ECM to the reluctor — a 24x PCM will not run a 58x crank signal.

    Try this, then this

    1. Verify 24x or 58x on the donor before money changes hands. — The ECM must match the reluctor; finding out after the purchase is expensive.. Worked if: You know the reluctor and have the matching PCM plan.
    2. For a Gen IV block on Gen III electronics, use the TRG-002 or the mechanical 24x conversion recipe. — Both are proven paths; the box is bolt-on, the mechanical route is cheaper.. Worked if: PCM sees a clean 24x crank signal and the engine runs.

    Every option we know of

    Maker / productPart #FitsPriceWhereStatus / notes
    Lingenfelter
    TRG-002 58x-to-24x conversion module
    TRG-002Gen IV 58x engine on Gen III 24x PCM$254.95 MSRPBuy
    lingenfelter.com
    active
    DIY/mechanical
    Gen III 24x crank + reluctor, Gen IV front cover and cam sensor, 1x cam sprocket, repin cam sensor harness
    Gen IV block on Gen III electronicsparts cost onlyDIY
    Page should cite Lingenfelter's pinout docs for the A/C pin swap

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: TRG-002 $254.95 MSRP; mechanical route is parts + labor.

  • Never starve the ECM of VSS. The ECM uses vehicle speed for fueling and idle control, and without it the engine can stall or buck. Split the raw signal to the PCM and a converter such as the Dakota Digital SGI-100BT for the gauges; a mechanical trans needs a 40-tooth reluctor and a two-wire sensor with a twisted-pair run.
    How to do it

    Check this first

    1. If the engine stalls or bucks on decel, check whether the PCM is seeing VSS at all.
    2. Confirm the signal type the PCM expects (two-wire AC on E38) before buying a sender.

    Try this, then this

    1. Get a raw speed signal to the PCM first — 40-tooth reluctor with a two-wire sensor on a twisted-pair run, or a bolt-in sender like the SEN-01-128. — The ECM uses VSS for fueling and idle; without it you get stalling and bucking.. Worked if: VSS reads correctly in the scanner.
    2. Split the signal to the gauges with the SGI-100BT. — One signal can feed both the PCM and the speedometer if it is conditioned and split properly.. Worked if: PCM and gauges agree on speed.

    Key numbers

    WhatValue
    40-tooth reluctor = 40 pulses per tailshaft revolutionStandard on 4L60E/4L80E output
    E38 expects a two-wire AC speed signalTwo-wire (variable reluctance) sensor
    Dakota SEN-01-128 is the bolt-in sender for older transmissions128,000 pulse-per-mile sine wave, direct replacement for the stock GM internal speed sensor; 7/8 in male thread fits TH350/TH400/700R4/2004R

    Every option we know of

    Maker / productPart #FitsPriceWhereStatus / notes
    Dakota Digital
    SGI-100BT signal interface
    SGI-100BTAny LS swap needing VSS conversion/splittingBuy
    dakotadigital.com / Summit
    active
    Dakota Digital
    SEN-01-128 speed sender
    SEN-01-128TH350, TH400, 700R4, 2004R (7/8 in male thread)Buy
    dakotadigital.com / Summit
    active
    DIY
    Mustang speed sensor in the NP205 transfer-case location
    NP205-equipped 4x4 swapscheapjunkyardused
    One user reports no stalling or idle issues

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: SGI-100BT roughly $100-150; sender roughly $50-100; wiring time.

  • Adapt the tach and senders. The LS tach signal is too weak for many stock tachs; use a Dakota box or a 10k resistor to key-on power, dialed in with a potentiometer first. Oil and coolant senders need adapters like the Autometer ATM-2268, and verify speedo accuracy against GPS.
    How to do it

    Check this first

    1. Try the tach on the PCM tach output bare first — later PCMs may drive it fine.
    2. If the tach reads weak or not at all, dial in with a potentiometer, then solder the fixed resistor.

    Try this, then this

    1. Wire the stock tach to the PCM tach output and test it bare. — Later PCMs may drive it without help.. Worked if: Tach reads correctly against a known RPM.
    2. Add the pull-up: 10k to key-on 12V (or 2k to 5V), dialed in with a potentiometer first. — Confirmed working values for weak LS tach signals.. Worked if: Tach reads steady and matches the scanner.
    3. Fit oil/coolant senders with thread adapters like the ATM-2268; verify the speedo against GPS. — LS ports are metric; the speedo needs a reality check after any VSS change.. Worked if: Gauges read true and the speedo matches GPS.

    Key numbers

    WhatValue
    Pull-up is the standard fix when the tach does not readRun a pull-up resistor if the tach signal is too weak
    Older PCMs need it; later ones may not97-99 ECUs typically needed the resistor; later ones often did not

    Every option we know of

    Maker / productPart #FitsPriceWhereStatus / notes
    AutoMeter
    ATM-2268 adapter
    ATM-2268LS oil pressure port behind intake (M16x1.5)$18.01beefcakeracing.comactive
    AutoMeter
    5284 LS gauge install kit (adapters + 10k resistor + instructions)
    5284LS swapsBuy
    AutoMeter dealers
    active
    DIY
    10k ohm resistor to key-on 12V (or 2k to 5V), dialed in with a potentiometer first
    Any weak LS tach signalpenniesany electronics supplierDIY
    Dakota Digital
    Tach signal interface boxes
    Stubborn stock tachsdakotadigital.comactive

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: Resistor pennies; ATM-2268 $18.01; an afternoon of wiring.

  • Skip the throttle-body hype. The stock throttle body supports 500+ hp and a ported one is worth roughly 5-10 hp. If you do the bump-stop mod, stay just shy of 90 degrees or it sets an SES code, and any throttle body change needs ETC scaler and idle-airflow adjustments.
    How to do it

    Check this first

    1. Before buying a throttle body, ask whether the combo is actually airflow-limited at the blade — under ~500 hp it usually is not.

    Try this, then this

    1. Keep the stock throttle body unless the combo is past ~500 hp. — It flows enough and costs nothing.. Worked if: No power left on the table at the blade.
    2. If you do the bump-stop mod, stop just shy of 90 degrees. — A full 90+ degrees sets an SES code.. Worked if: Blade opens further with no code.
    3. After any throttle body change, adjust the ETC scaler and idle-airflow settings. — The PCM's airflow model follows the blade size.. Worked if: Idle is stable and desired vs actual airflow agree.

    Key numbers

    WhatValue
    Stock throttle body power ceilingGood to 500+ hp
    Bump-stop mod limitGrind the stop so the blade opens closer to 90 degrees but stays shy of it; a full 90+ degrees sets an SES code
    Any throttle body change needs tune workETC scaler and idle-airflow settings must be adjusted

    Every option we know of

    Maker / productPart #FitsPriceWhereStatus / notes
    Porting shops
    Ported stock throttle body
    Stock-location upgradevariousactive
    Worth roughly 4-6 rwhp
    Nick Williams
    90mm / 102mm throttle bodies
    Big-intake combos (FAST 90/102 etc.)dealersactive
    Needs ETC scaler and idle-airflow tune work

    Prices are approximate as of September 2026. We list every option we know of, including small shops and used parts we can't link to. Confirm fitment with the seller.

    Time and cost: Free to keep the stocker; ported units and aftermarket TBs run $150-500+.

Based on what we've seen work across our own builds, our friends' builds and the wider LS community, reviewed by our lead shop tuner (over 20 years of LS and LT tuning experience). Every combination is different, so use at your own risk and check our safe tuning limits before any wide-open pass.

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